Package index • serodynamics

Simulate case data

sim_case_data(): Simulate longitudinal case follow-up data from a homogeneous population

Prepare data for analysis

serodynamics_example(): Get path to an example file

load_data(): load and format data

as_case_data(): Convert data into case_data

prep_data(): prepare data for JAGs

Visualize data

autoplot(<case_data>): Plot case data

Prepare auxiliary JAGS inputs

prep_priors(): Prepare priors

initsfunction(): JAGS chain initialization function

Model seroreponse

run_mod(): Run Jags Model

Postprocess JAGS output

postprocess_jags_output(): Postprocess JAGS output

Example data sets

serodynamics_example(): Get path to an example file

nepal_sees: SEES Typhoid data